Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.6□□□□□ -0.39
Ldb2O55203 Gm8762-201ENSMUST00000193486 339 ntBASIC12.6□□□□□ -0.39
Ldb2O55203 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ldb2O55203 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.6□□□□□ -0.39
Ldb2O55203 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.6□□□□□ -0.39
Ldb2O55203 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.6□□□□□ -0.39
Ldb2O55203 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.6□□□□□ -0.39
Ldb2O55203 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ldb2O55203 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.6□□□□□ -0.39
Ldb2O55203 Daam2-202ENSMUST00000224595 1926 ntBASIC12.6□□□□□ -0.39
Ldb2O55203 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
Ldb2O55203 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ldb2O55203 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ldb2O55203 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.59□□□□□ -0.39
Ldb2O55203 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ldb2O55203 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.59□□□□□ -0.39
Ldb2O55203 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ldb2O55203 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.59□□□□□ -0.39
Ldb2O55203 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.59□□□□□ -0.39
Ldb2O55203 Snora78-201ENSMUST00000158630 128 ntBASIC12.59□□□□□ -0.39
Ldb2O55203 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.59□□□□□ -0.39
Ldb2O55203 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.59□□□□□ -0.39
Ldb2O55203 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ldb2O55203 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ldb2O55203 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ldb2O55203 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Ldb2O55203 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.58□□□□□ -0.39
Ldb2O55203 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
Ldb2O55203 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.58□□□□□ -0.39
Ldb2O55203 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ldb2O55203 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.58□□□□□ -0.4
Ldb2O55203 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm22018-201ENSMUST00000104357 131 ntBASIC12.58□□□□□ -0.4
Ldb2O55203 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.58□□□□□ -0.4
Ldb2O55203 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.58□□□□□ -0.4
Ldb2O55203 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.58□□□□□ -0.4
Ldb2O55203 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.58□□□□□ -0.4
Ldb2O55203 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Ldb2O55203 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ldb2O55203 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ldb2O55203 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms