Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Matn3O35701 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Matn3O35701 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Matn3O35701 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Gm12151-201ENSMUST00000121374 290 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 Gm8227-201ENSMUST00000223306 571 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Matn3O35701 Gm24447-201ENSMUST00000083977 338 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.53□□□□□ -0.56
Matn3O35701 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Matn3O35701 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Matn3O35701 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Matn3O35701 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Matn3O35701 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Matn3O35701 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Matn3O35701 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Matn3O35701 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Matn3O35701 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Matn3O35701 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Matn3O35701 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Matn3O35701 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Gm27989-201ENSMUST00000184721 107 ntBASIC11.52□□□□□ -0.57
Matn3O35701 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Gm6888-201ENSMUST00000221983 706 ntBASIC11.52□□□□□ -0.57
Matn3O35701 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Matn3O35701 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Gm26035-201ENSMUST00000083065 308 ntBASIC11.52□□□□□ -0.57
Matn3O35701 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Matn3O35701 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Matn3O35701 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Matn3O35701 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.51□□□□□ -0.57
Matn3O35701 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Matn3O35701 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms