Protein–RNA interactions for Protein: O35488

Slc27a2, Very long-chain acyl-CoA synthetase, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc27a2O35488 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Slc27a2O35488 Gm15920-201ENSMUST00000118998 402 ntBASIC12.8□□□□□ -0.36
Slc27a2O35488 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Slc27a2O35488 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.8□□□□□ -0.36
Slc27a2O35488 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Slc27a2O35488 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.8□□□□□ -0.36
Slc27a2O35488 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Slc27a2O35488 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.8□□□□□ -0.36
Slc27a2O35488 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc27a2O35488 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Map1b-203ENSMUST00000223725 2669 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Mir7684-201ENSMUST00000183858 60 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Mir8102-201ENSMUST00000184148 139 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Itm2b-204ENSMUST00000228637 783 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gm26035-201ENSMUST00000083065 308 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Syt7-204ENSMUST00000223586 1344 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc27a2O35488 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc27a2O35488 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.79□□□□□ -0.36
Slc27a2O35488 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Slc27a2O35488 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Slc27a2O35488 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms