Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Casp6O08738 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Casp6O08738 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.87□□□□□ -0.67
Casp6O08738 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.87□□□□□ -0.67
Casp6O08738 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.87□□□□□ -0.67
Casp6O08738 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.87□□□□□ -0.67
Casp6O08738 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.87□□□□□ -0.67
Casp6O08738 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Gm8885-201ENSMUST00000189382 598 ntBASIC10.87□□□□□ -0.67
Casp6O08738 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Gm8712-201ENSMUST00000221090 701 ntBASIC10.87□□□□□ -0.67
Casp6O08738 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.87□□□□□ -0.67
Casp6O08738 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.87□□□□□ -0.67
Casp6O08738 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.87□□□□□ -0.67
Casp6O08738 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Casp6O08738 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Casp6O08738 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Casp6O08738 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Casp6O08738 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Casp6O08738 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC10.86□□□□□ -0.67
Casp6O08738 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.86□□□□□ -0.67
Casp6O08738 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.86□□□□□ -0.67
Casp6O08738 Gm13736-201ENSMUST00000119272 253 ntBASIC10.86□□□□□ -0.67
Casp6O08738 Gm14999-201ENSMUST00000121039 624 ntBASIC10.86□□□□□ -0.67
Casp6O08738 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.86□□□□□ -0.67
Casp6O08738 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.86□□□□□ -0.67
Casp6O08738 Gm45433-201ENSMUST00000209386 247 ntBASIC10.86□□□□□ -0.67
Casp6O08738 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.86□□□□□ -0.67
Casp6O08738 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.86□□□□□ -0.67
Casp6O08738 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.86□□□□□ -0.67
Casp6O08738 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.86□□□□□ -0.67
Casp6O08738 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.86□□□□□ -0.67
Casp6O08738 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Casp6O08738 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms