Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm13813-201ENSMUST00000120998 787 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm6736-201ENSMUST00000166583 948 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm7730-201ENSMUST00000212486 454 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Shisa8J3QNX5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Gm28760-201ENSMUST00000185995 736 ntBASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Gm6458-201ENSMUST00000211573 635 ntBASIC11.55□□□□□ -0.56
Shisa8J3QNX5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Shisa8J3QNX5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gm12151-201ENSMUST00000121374 290 ntBASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gm27989-201ENSMUST00000184721 107 ntBASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.54□□□□□ -0.56
Shisa8J3QNX5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.54□□□□□ -0.56
Shisa8J3QNX5 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.54□□□□□ -0.56
Shisa8J3QNX5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms