Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Gm44855-201ENSMUST00000205725 362 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdh1F7BJK1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Gm27437-201ENSMUST00000183429 107 ntBASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Mir339-201ENSMUST00000083659 96 ntBASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdh1F7BJK1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Gm28693-202ENSMUST00000190758 331 ntBASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Gm6218-201ENSMUST00000219812 628 ntBASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pcdh1F7BJK1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms