Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Mir3060-201ENSMUST00000175339 83 ntBASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Gm21092-201ENSMUST00000178995 955 ntBASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Gm5599-201ENSMUST00000209602 788 ntBASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc188F6WEU2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc188F6WEU2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm23255-201ENSMUST00000102244 110 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm23675-201ENSMUST00000157311 125 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm4868-201ENSMUST00000164138 789 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm8451-201ENSMUST00000170338 447 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm3551-201ENSMUST00000190750 664 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 BC106175-202ENSMUST00000219344 1213 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm7536-201ENSMUST00000077389 444 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm5453-201ENSMUST00000080866 447 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc188F6WEU2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc188F6WEU2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms