Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4aE9Q735 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.19■□□□□ 0.02
Ube4aE9Q735 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ube4aE9Q735 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm29615-201ENSMUST00000185371 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28224-201ENSMUST00000186078 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm29001-201ENSMUST00000186177 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28292-201ENSMUST00000186593 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28101-201ENSMUST00000187608 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm29076-201ENSMUST00000187689 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28302-201ENSMUST00000187931 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28646-201ENSMUST00000188220 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28205-201ENSMUST00000189177 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm29032-201ENSMUST00000189797 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm28695-201ENSMUST00000190300 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm37448-201ENSMUST00000192795 697 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Gm44958-201ENSMUST00000203734 736 ntBASIC15.18■□□□□ 0.02
Ube4aE9Q735 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4aE9Q735 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm5616-201ENSMUST00000165252 384 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm8741-201ENSMUST00000174736 384 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm18730-201ENSMUST00000218038 343 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.17■□□□□ 0.02
Ube4aE9Q735 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4aE9Q735 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4aE9Q735 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms