Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Srp54bE9PXC0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Srp54bE9PXC0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm16296-201ENSMUST00000159905 325 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm26461-201ENSMUST00000175064 290 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.52□□□□□ -0.41
Srp54bE9PXC0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Srp54bE9PXC0 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gm14017-201ENSMUST00000121934 386 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gm8018-201ENSMUST00000173536 789 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gm27023-201ENSMUST00000182372 285 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 AA914427-201ENSMUST00000193194 1166 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Srp54bE9PXC0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms