Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clca3bE9PUL3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm14999-201ENSMUST00000121039 624 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm9022-201ENSMUST00000182482 992 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.62□□□□□ -0.23
Clca3bE9PUL3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm13570-201ENSMUST00000140763 309 ntBASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm24845-201ENSMUST00000158034 109 ntBASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clca3bE9PUL3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms