Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.37□□□□□ -0.59
Shank1D3YZU1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.37□□□□□ -0.59
Shank1D3YZU1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shank1D3YZU1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.36□□□□□ -0.59
Shank1D3YZU1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.36□□□□□ -0.59
Shank1D3YZU1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm10312-201ENSMUST00000078515 489 ntBASIC11.36□□□□□ -0.59
Shank1D3YZU1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.36□□□□□ -0.59
Shank1D3YZU1 Gm12058-201ENSMUST00000118614 437 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm17812-201ENSMUST00000204935 318 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm32999-201ENSMUST00000192693 562 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm39404-201ENSMUST00000216350 313 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.35□□□□□ -0.59
Shank1D3YZU1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Shank1D3YZU1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms