Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tmf1B9EKI3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tmf1B9EKI3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tmf1B9EKI3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gm22323-201ENSMUST00000103832 109 ntBASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gm14726-201ENSMUST00000120623 896 ntBASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gm14999-201ENSMUST00000121039 624 ntBASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gm14760-201ENSMUST00000121831 999 ntBASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tmf1B9EKI3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tmf1B9EKI3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gm10076-201ENSMUST00000073238 384 ntBASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC17.12■□□□□ 0.33
Tmf1B9EKI3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tmf1B9EKI3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms