Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a6B1AVK5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm18367-201ENSMUST00000176139 600 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm17931-201ENSMUST00000208132 634 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a6B1AVK5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm11956-201ENSMUST00000119525 512 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm13937-201ENSMUST00000121000 988 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm12407-201ENSMUST00000180219 324 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm28388-201ENSMUST00000186262 437 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm5714-201ENSMUST00000197343 566 ntBASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.77□□□□□ -0.37
Col4a6B1AVK5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Gm15566-201ENSMUST00000121130 590 ntBASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Gm44158-201ENSMUST00000203881 505 ntBASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col4a6B1AVK5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col4a6B1AVK5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms