Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm14057-201ENSMUST00000120631 482 ntBASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm15321-201ENSMUST00000121290 288 ntBASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm29608-201ENSMUST00000190444 463 ntBASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm24447-201ENSMUST00000083977 338 ntBASIC11.26□□□□□ -0.61
Gm11127A7VMS2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm11127A7VMS2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm11524-201ENSMUST00000119349 807 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm16215-201ENSMUST00000161990 637 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm19078-201ENSMUST00000206311 727 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm7730-201ENSMUST00000212486 454 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm11127A7VMS2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.25□□□□□ -0.61
Gm11127A7VMS2 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm11127A7VMS2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms