Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt28A6BLY7 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.02□□□□□ -0.16
Krt28A6BLY7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.02□□□□□ -0.16
Krt28A6BLY7 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Krt28A6BLY7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Krt28A6BLY7 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Gm23596-201ENSMUST00000104304 132 ntBASIC14.02□□□□□ -0.17
Krt28A6BLY7 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.02□□□□□ -0.17
Krt28A6BLY7 Gm42937-201ENSMUST00000197360 752 ntBASIC14.02□□□□□ -0.17
Krt28A6BLY7 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.02□□□□□ -0.17
Krt28A6BLY7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Krt28A6BLY7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm23085-201ENSMUST00000157849 293 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm25072-201ENSMUST00000175233 235 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm23153-201ENSMUST00000175323 313 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm10774-201ENSMUST00000188689 204 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm34023-201ENSMUST00000195539 217 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm9463-201ENSMUST00000206707 601 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.01□□□□□ -0.17
Krt28A6BLY7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt28A6BLY7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Krt28A6BLY7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Krt28A6BLY7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Krt28A6BLY7 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt28A6BLY7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14□□□□□ -0.17
Krt28A6BLY7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Krt28A6BLY7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Krt28A6BLY7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Krt28A6BLY7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14□□□□□ -0.17
Krt28A6BLY7 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14□□□□□ -0.17
Krt28A6BLY7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt28A6BLY7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms