Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm5419-201ENSMUST00000119301 527 ntBASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.02□□□□□ -0.17
Scn3aA2ASI5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn3aA2ASI5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm5369-201ENSMUST00000217499 588 ntBASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gm270-201ENSMUST00000223010 976 ntBASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn3aA2ASI5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.01□□□□□ -0.17
Scn3aA2ASI5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14□□□□□ -0.17
Scn3aA2ASI5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Gm11331-201ENSMUST00000119764 288 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 Gm12266-201ENSMUST00000120311 962 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14□□□□□ -0.17
Scn3aA2ASI5 CT571245.2-201ENSMUST00000218421 305 ntBASIC14□□□□□ -0.17
Scn3aA2ASI5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn3aA2ASI5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14□□□□□ -0.17
Scn3aA2ASI5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms