Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm11637-201ENSMUST00000120601 592 ntBASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gm16479-201ENSMUST00000121706 932 ntBASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gm10576-201ENSMUST00000191927 825 ntBASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gm19184-201ENSMUST00000196798 928 ntBASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc112A0AUP1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Gm14760-201ENSMUST00000121831 999 ntBASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc112A0AUP1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Gm17208-201ENSMUST00000168388 535 ntBASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Gm37042-201ENSMUST00000193816 581 ntBASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Gm37497-201ENSMUST00000195830 798 ntBASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc112A0AUP1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc112A0AUP1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc112A0AUP1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Ccdc112A0AUP1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc112A0AUP1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Snord83b-201ENSMUST00000104546 94 ntBASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm11803-201ENSMUST00000119966 444 ntBASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm2231-201ENSMUST00000125661 612 ntBASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm12091-201ENSMUST00000146791 830 ntBASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc112A0AUP1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms