Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm5779-201ENSMUST00000218467 910 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm14767-201ENSMUST00000121559 586 ntBASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mir7221-201ENSMUST00000184009 72 ntBASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm2213-201ENSMUST00000197485 688 ntBASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms