Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Trav6n-6A0A075B6B2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm12859-201ENSMUST00000117834 427 ntBASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm37917-201ENSMUST00000194711 392 ntBASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm15823-201ENSMUST00000064305 670 ntBASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav6n-6A0A075B6B2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms