Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm12091-201ENSMUST00000146791 830 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm2495-201ENSMUST00000191160 466 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm18018-201ENSMUST00000198273 408 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5-4A0A075B652 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Gm28911-201ENSMUST00000188837 117 ntBASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5-4A0A075B652 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5-4A0A075B652 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5-4A0A075B652 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms