Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav8-1A0A075B641 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Rprl2-201ENSMUST00000157150 290 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm8927-201ENSMUST00000181978 981 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm19931-201ENSMUST00000198920 368 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm45683-201ENSMUST00000210825 1247 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm3222-201ENSMUST00000071282 990 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav8-1A0A075B641 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Gm27631-201ENSMUST00000184163 466 ntBASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Gm18049-201ENSMUST00000208909 581 ntBASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trav8-1A0A075B641 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms