Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav7n-4A0A075B620 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Cog3-203ENSMUST00000227473 4197 ntBASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav7n-4A0A075B620 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gm46209-201ENSMUST00000217912 553 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Shd-206ENSMUST00000225145 998 ntBASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav7n-4A0A075B620 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms