Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.07■□□□□ 0.96
H2afb2S4R1M3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
H2afb2S4R1M3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2afb2S4R1M3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.07■□□□□ 0.96
H2afb2S4R1M3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
H2afb2S4R1M3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
H2afb2S4R1M3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb2S4R1M3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb2S4R1M3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.05■□□□□ 0.96
H2afb2S4R1M3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.05■□□□□ 0.96
H2afb2S4R1M3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
H2afb2S4R1M3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
H2afb2S4R1M3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
H2afb2S4R1M3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
H2afb2S4R1M3 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.02■□□□□ 0.96
H2afb2S4R1M3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H2afb2S4R1M3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
H2afb2S4R1M3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
H2afb2S4R1M3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.02■□□□□ 0.96
H2afb2S4R1M3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
H2afb2S4R1M3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
H2afb2S4R1M3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
H2afb2S4R1M3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
H2afb2S4R1M3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
H2afb2S4R1M3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21■□□□□ 0.95
H2afb2S4R1M3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
H2afb2S4R1M3 Gm12504-201ENSMUST00000120860 2231 ntBASIC21■□□□□ 0.95
H2afb2S4R1M3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
H2afb2S4R1M3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb2S4R1M3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb2S4R1M3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
H2afb2S4R1M3 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.98■□□□□ 0.95
H2afb2S4R1M3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb2S4R1M3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb2S4R1M3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
H2afb2S4R1M3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb2S4R1M3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
H2afb2S4R1M3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb2S4R1M3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb2S4R1M3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
H2afb2S4R1M3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb2S4R1M3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb2S4R1M3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H2afb2S4R1M3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb2S4R1M3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
H2afb2S4R1M3 Gm13238-201ENSMUST00000117655 780 ntBASIC20.96■□□□□ 0.95
H2afb2S4R1M3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.96■□□□□ 0.95
H2afb2S4R1M3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb2S4R1M3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
H2afb2S4R1M3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Gm43566-201ENSMUST00000196851 808 ntBASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
H2afb2S4R1M3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms