Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cx3cr1Q9Z0D9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cr1Q9Z0D9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cr1Q9Z0D9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cx3cr1Q9Z0D9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.76■□□□□ 0.43
Cx3cr1Q9Z0D9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Cx3cr1Q9Z0D9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cx3cr1Q9Z0D9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cx3cr1Q9Z0D9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cr1Q9Z0D9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cr1Q9Z0D9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cr1Q9Z0D9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Cx3cr1Q9Z0D9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cx3cr1Q9Z0D9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Cx3cr1Q9Z0D9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cx3cr1Q9Z0D9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cx3cr1Q9Z0D9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cr1Q9Z0D9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cx3cr1Q9Z0D9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cr1Q9Z0D9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cr1Q9Z0D9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cr1Q9Z0D9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cr1Q9Z0D9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cr1Q9Z0D9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cx3cr1Q9Z0D9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cx3cr1Q9Z0D9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms