Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.13■□□□□ 0.81
Lhx9Q9WUH2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Lhx9Q9WUH2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx9Q9WUH2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx9Q9WUH2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.11■□□□□ 0.81
Lhx9Q9WUH2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx9Q9WUH2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx9Q9WUH2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Lhx9Q9WUH2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx9Q9WUH2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx9Q9WUH2 Gm40881-201ENSMUST00000223397 166 ntBASIC20.09■□□□□ 0.81
Lhx9Q9WUH2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx9Q9WUH2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx9Q9WUH2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.08■□□□□ 0.81
Lhx9Q9WUH2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lhx9Q9WUH2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx9Q9WUH2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
Lhx9Q9WUH2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.05■□□□□ 0.8
Lhx9Q9WUH2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx9Q9WUH2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.03■□□□□ 0.8
Lhx9Q9WUH2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lhx9Q9WUH2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx9Q9WUH2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx9Q9WUH2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lhx9Q9WUH2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Lhx9Q9WUH2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Gm10399-202ENSMUST00000202768 748 ntBASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lhx9Q9WUH2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms