Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim39Q9ESN2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim39Q9ESN2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim39Q9ESN2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim39Q9ESN2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim39Q9ESN2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim39Q9ESN2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim39Q9ESN2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim39Q9ESN2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim39Q9ESN2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim39Q9ESN2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim39Q9ESN2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim39Q9ESN2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim39Q9ESN2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim39Q9ESN2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim39Q9ESN2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim39Q9ESN2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim39Q9ESN2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim39Q9ESN2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim39Q9ESN2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim39Q9ESN2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim39Q9ESN2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim39Q9ESN2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim39Q9ESN2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim39Q9ESN2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim39Q9ESN2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim39Q9ESN2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim39Q9ESN2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim39Q9ESN2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim39Q9ESN2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.34■□□□□ 0.69
Trim39Q9ESN2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim39Q9ESN2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim39Q9ESN2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms