Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nif3l1Q9EQ80 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nif3l1Q9EQ80 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nif3l1Q9EQ80 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nif3l1Q9EQ80 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nif3l1Q9EQ80 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nif3l1Q9EQ80 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Nif3l1Q9EQ80 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nif3l1Q9EQ80 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nif3l1Q9EQ80 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Nif3l1Q9EQ80 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nif3l1Q9EQ80 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nif3l1Q9EQ80 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nif3l1Q9EQ80 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.89■□□□□ 0.93
Nif3l1Q9EQ80 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nif3l1Q9EQ80 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nif3l1Q9EQ80 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nif3l1Q9EQ80 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Gm10232-201ENSMUST00000089221 720 ntBASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nif3l1Q9EQ80 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nif3l1Q9EQ80 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nif3l1Q9EQ80 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nif3l1Q9EQ80 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nif3l1Q9EQ80 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nif3l1Q9EQ80 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nif3l1Q9EQ80 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.83■□□□□ 0.93
Nif3l1Q9EQ80 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Nif3l1Q9EQ80 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Nif3l1Q9EQ80 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nif3l1Q9EQ80 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Gm5812-201ENSMUST00000061073 957 ntBASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Nif3l1Q9EQ80 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Nif3l1Q9EQ80 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms