Protein–RNA interactions for Protein: Q9EPL5

Mmp1a, Interstitial collagenase A, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1aQ9EPL5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp1aQ9EPL5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp1aQ9EPL5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp1aQ9EPL5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.21■□□□□ 0.83
Mmp1aQ9EPL5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Mmp1aQ9EPL5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Mmp1aQ9EPL5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Gm5874-201ENSMUST00000096101 508 ntBASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1aQ9EPL5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp1aQ9EPL5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp1aQ9EPL5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Mmp1aQ9EPL5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Gm8493-201ENSMUST00000196881 489 ntBASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1aQ9EPL5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1aQ9EPL5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1aQ9EPL5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1aQ9EPL5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1aQ9EPL5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1aQ9EPL5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1aQ9EPL5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp1aQ9EPL5 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.14■□□□□ 0.81
Mmp1aQ9EPL5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp1aQ9EPL5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp1aQ9EPL5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp1aQ9EPL5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp1aQ9EPL5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp1aQ9EPL5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.13■□□□□ 0.81
Mmp1aQ9EPL5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp1aQ9EPL5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp1aQ9EPL5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp1aQ9EPL5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.11■□□□□ 0.81
Mmp1aQ9EPL5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp1aQ9EPL5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Mmp1aQ9EPL5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp1aQ9EPL5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.09■□□□□ 0.81
Mmp1aQ9EPL5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms