Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2aQ9DB34 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2aQ9DB34 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.91■■□□□ 1.1
Chmp2aQ9DB34 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2aQ9DB34 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2aQ9DB34 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp2aQ9DB34 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp2aQ9DB34 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Chmp2aQ9DB34 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Chmp2aQ9DB34 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Chmp2aQ9DB34 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Chmp2aQ9DB34 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp2aQ9DB34 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp2aQ9DB34 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.89■■□□□ 1.09
Chmp2aQ9DB34 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp2aQ9DB34 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chmp2aQ9DB34 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp2aQ9DB34 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.86■■□□□ 1.09
Chmp2aQ9DB34 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp2aQ9DB34 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp2aQ9DB34 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Chmp2aQ9DB34 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp2aQ9DB34 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.83■■□□□ 1.09
Chmp2aQ9DB34 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp2aQ9DB34 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.83■■□□□ 1.09
Chmp2aQ9DB34 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.83■■□□□ 1.09
Chmp2aQ9DB34 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.83■■□□□ 1.08
Chmp2aQ9DB34 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp2aQ9DB34 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.83■■□□□ 1.08
Chmp2aQ9DB34 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp2aQ9DB34 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp2aQ9DB34 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp2aQ9DB34 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp2aQ9DB34 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chmp2aQ9DB34 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp2aQ9DB34 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2aQ9DB34 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2aQ9DB34 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp2aQ9DB34 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms