Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chaf1bQ9D0N7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chaf1bQ9D0N7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chaf1bQ9D0N7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chaf1bQ9D0N7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chaf1bQ9D0N7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chaf1bQ9D0N7 Gm44428-201ENSMUST00000204474 874 ntBASIC19.65■□□□□ 0.74
Chaf1bQ9D0N7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chaf1bQ9D0N7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Chaf1bQ9D0N7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chaf1bQ9D0N7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.64■□□□□ 0.74
Chaf1bQ9D0N7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Chaf1bQ9D0N7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chaf1bQ9D0N7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.63■□□□□ 0.73
Chaf1bQ9D0N7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chaf1bQ9D0N7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Chaf1bQ9D0N7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chaf1bQ9D0N7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chaf1bQ9D0N7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Chaf1bQ9D0N7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chaf1bQ9D0N7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chaf1bQ9D0N7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chaf1bQ9D0N7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chaf1bQ9D0N7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chaf1bQ9D0N7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chaf1bQ9D0N7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chaf1bQ9D0N7 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.58■□□□□ 0.73
Chaf1bQ9D0N7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Chaf1bQ9D0N7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Chaf1bQ9D0N7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chaf1bQ9D0N7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chaf1bQ9D0N7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chaf1bQ9D0N7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chaf1bQ9D0N7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Chaf1bQ9D0N7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Gm6311-201ENSMUST00000073790 878 ntBASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chaf1bQ9D0N7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chaf1bQ9D0N7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms