Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hcfc1r1Q9CYQ5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hcfc1r1Q9CYQ5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcfc1r1Q9CYQ5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Hcfc1r1Q9CYQ5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gm44428-201ENSMUST00000204474 874 ntBASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcfc1r1Q9CYQ5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcfc1r1Q9CYQ5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gm11599-201ENSMUST00000118720 878 ntBASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gm7432-201ENSMUST00000210343 879 ntBASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcfc1r1Q9CYQ5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcfc1r1Q9CYQ5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hcfc1r1Q9CYQ5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcfc1r1Q9CYQ5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcfc1r1Q9CYQ5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms