Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm7332-201ENSMUST00000118351 454 ntBASIC22.61■■□□□ 1.21
Ssr1Q9CY50 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssr1Q9CY50 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ssr1Q9CY50 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ssr1Q9CY50 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Ssr1Q9CY50 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ssr1Q9CY50 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ssr1Q9CY50 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ssr1Q9CY50 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.6■■□□□ 1.21
Ssr1Q9CY50 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssr1Q9CY50 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssr1Q9CY50 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssr1Q9CY50 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssr1Q9CY50 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ssr1Q9CY50 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ssr1Q9CY50 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ssr1Q9CY50 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ssr1Q9CY50 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.58■■□□□ 1.2
Ssr1Q9CY50 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ssr1Q9CY50 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ssr1Q9CY50 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ssr1Q9CY50 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Ssr1Q9CY50 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.55■■□□□ 1.2
Ssr1Q9CY50 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ssr1Q9CY50 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ssr1Q9CY50 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.54■■□□□ 1.2
Ssr1Q9CY50 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ssr1Q9CY50 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ssr1Q9CY50 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ssr1Q9CY50 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.54■■□□□ 1.2
Ssr1Q9CY50 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.53■■□□□ 1.2
Ssr1Q9CY50 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ssr1Q9CY50 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ssr1Q9CY50 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ssr1Q9CY50 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.52■■□□□ 1.2
Ssr1Q9CY50 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ssr1Q9CY50 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.52■■□□□ 1.2
Ssr1Q9CY50 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ssr1Q9CY50 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ssr1Q9CY50 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ssr1Q9CY50 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssr1Q9CY50 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ssr1Q9CY50 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssr1Q9CY50 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ssr1Q9CY50 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ssr1Q9CY50 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssr1Q9CY50 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssr1Q9CY50 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ssr1Q9CY50 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.49■■□□□ 1.19
Ssr1Q9CY50 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssr1Q9CY50 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ssr1Q9CY50 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ssr1Q9CY50 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Ssr1Q9CY50 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.47■■□□□ 1.19
Ssr1Q9CY50 Gm12366-201ENSMUST00000121722 873 ntBASIC22.47■■□□□ 1.19
Ssr1Q9CY50 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.47■■□□□ 1.19
Ssr1Q9CY50 Mir6538-201ENSMUST00000183713 110 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms