Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.85■■□□□ 1.09
Cldnd1Q9CQX5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.85■■□□□ 1.09
Cldnd1Q9CQX5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cldnd1Q9CQX5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cldnd1Q9CQX5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cldnd1Q9CQX5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cldnd1Q9CQX5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cldnd1Q9CQX5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cldnd1Q9CQX5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Cldnd1Q9CQX5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cldnd1Q9CQX5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.82■■□□□ 1.08
Cldnd1Q9CQX5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.82■■□□□ 1.08
Cldnd1Q9CQX5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cldnd1Q9CQX5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.82■■□□□ 1.08
Cldnd1Q9CQX5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cldnd1Q9CQX5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.82■■□□□ 1.08
Cldnd1Q9CQX5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cldnd1Q9CQX5 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.81■■□□□ 1.08
Cldnd1Q9CQX5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Cldnd1Q9CQX5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cldnd1Q9CQX5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cldnd1Q9CQX5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cldnd1Q9CQX5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Cldnd1Q9CQX5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.8■■□□□ 1.08
Cldnd1Q9CQX5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cldnd1Q9CQX5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cldnd1Q9CQX5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cldnd1Q9CQX5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cldnd1Q9CQX5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cldnd1Q9CQX5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.79■■□□□ 1.08
Cldnd1Q9CQX5 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.79■■□□□ 1.08
Cldnd1Q9CQX5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cldnd1Q9CQX5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Gm7291-201ENSMUST00000199147 382 ntBASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cldnd1Q9CQX5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cldnd1Q9CQX5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cldnd1Q9CQX5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.77■■□□□ 1.08
Cldnd1Q9CQX5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cldnd1Q9CQX5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.77■■□□□ 1.08
Cldnd1Q9CQX5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cldnd1Q9CQX5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cldnd1Q9CQX5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cldnd1Q9CQX5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.77■■□□□ 1.07
Cldnd1Q9CQX5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.76■■□□□ 1.07
Cldnd1Q9CQX5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cldnd1Q9CQX5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cldnd1Q9CQX5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cldnd1Q9CQX5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cldnd1Q9CQX5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cldnd1Q9CQX5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cldnd1Q9CQX5 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.73■■□□□ 1.07
Cldnd1Q9CQX5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.73■■□□□ 1.07
Cldnd1Q9CQX5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cldnd1Q9CQX5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cldnd1Q9CQX5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cldnd1Q9CQX5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cldnd1Q9CQX5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cldnd1Q9CQX5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cldnd1Q9CQX5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cldnd1Q9CQX5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms