Protein–RNA interactions for Protein: Q9CQ90

Uncharacterized protein C9orf85 homolog, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQ90 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.76■□□□□ 0.43
Q9CQ90 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CQ90 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CQ90 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CQ90 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Q9CQ90 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CQ90 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CQ90 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Q9CQ90 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CQ90 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CQ90 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.75■□□□□ 0.43
Q9CQ90 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CQ90 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CQ90 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CQ90 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.74■□□□□ 0.43
Q9CQ90 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.74■□□□□ 0.43
Q9CQ90 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.74■□□□□ 0.43
Q9CQ90 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.74■□□□□ 0.43
Q9CQ90 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Q9CQ90 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CQ90 Gm25007-201ENSMUST00000083808 133 ntBASIC17.74■□□□□ 0.43
Q9CQ90 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Q9CQ90 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.74■□□□□ 0.43
Q9CQ90 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Q9CQ90 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CQ90 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CQ90 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Q9CQ90 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CQ90 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.73■□□□□ 0.43
Q9CQ90 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CQ90 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CQ90 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CQ90 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CQ90 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Q9CQ90 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Q9CQ90 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CQ90 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.72■□□□□ 0.43
Q9CQ90 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Q9CQ90 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CQ90 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CQ90 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CQ90 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.71■□□□□ 0.43
Q9CQ90 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.71■□□□□ 0.43
Q9CQ90 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.71■□□□□ 0.43
Q9CQ90 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Q9CQ90 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Q9CQ90 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Q9CQ90 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Q9CQ90 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.7■□□□□ 0.42
Q9CQ90 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Q9CQ90 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.7■□□□□ 0.42
Q9CQ90 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Q9CQ90 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CQ90 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CQ90 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Q9CQ90 Gm11434-201ENSMUST00000122379 629 ntBASIC17.69■□□□□ 0.42
Q9CQ90 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CQ90 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Q9CQ90 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.69■□□□□ 0.42
Q9CQ90 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.69■□□□□ 0.42
Q9CQ90 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CQ90 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CQ90 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.69■□□□□ 0.42
Q9CQ90 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CQ90 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.69■□□□□ 0.42
Q9CQ90 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CQ90 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Q9CQ90 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Q9CQ90 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CQ90 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CQ90 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CQ90 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.68■□□□□ 0.42
Q9CQ90 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CQ90 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CQ90 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CQ90 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Q9CQ90 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CQ90 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.67■□□□□ 0.42
Q9CQ90 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.67■□□□□ 0.42
Q9CQ90 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.66■□□□□ 0.42
Q9CQ90 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Q9CQ90 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.66■□□□□ 0.42
Q9CQ90 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CQ90 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q9CQ90 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms