Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Clcc1Q99LI2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcc1Q99LI2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcc1Q99LI2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcc1Q99LI2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clcc1Q99LI2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcc1Q99LI2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clcc1Q99LI2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.78■□□□□ 0.92
Clcc1Q99LI2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.77■□□□□ 0.92
Clcc1Q99LI2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcc1Q99LI2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcc1Q99LI2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcc1Q99LI2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcc1Q99LI2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcc1Q99LI2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcc1Q99LI2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.76■□□□□ 0.91
Clcc1Q99LI2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clcc1Q99LI2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.76■□□□□ 0.91
Clcc1Q99LI2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcc1Q99LI2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.76■□□□□ 0.91
Clcc1Q99LI2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Clcc1Q99LI2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcc1Q99LI2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcc1Q99LI2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcc1Q99LI2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcc1Q99LI2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clcc1Q99LI2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.73■□□□□ 0.91
Clcc1Q99LI2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clcc1Q99LI2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Gm13241-201ENSMUST00000094493 780 ntBASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Clcc1Q99LI2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.7■□□□□ 0.9
Clcc1Q99LI2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcc1Q99LI2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcc1Q99LI2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clcc1Q99LI2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clcc1Q99LI2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcc1Q99LI2 Gm21956-201ENSMUST00000179946 522 ntBASIC20.68■□□□□ 0.9
Clcc1Q99LI2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.68■□□□□ 0.9
Clcc1Q99LI2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms