Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Homer3Q99JP6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Homer3Q99JP6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Homer3Q99JP6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Homer3Q99JP6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Homer3Q99JP6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Homer3Q99JP6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Homer3Q99JP6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Homer3Q99JP6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Homer3Q99JP6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Homer3Q99JP6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Homer3Q99JP6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Homer3Q99JP6 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.89■□□□□ 0.93
Homer3Q99JP6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Homer3Q99JP6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Homer3Q99JP6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Homer3Q99JP6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Homer3Q99JP6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Homer3Q99JP6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Homer3Q99JP6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Homer3Q99JP6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Homer3Q99JP6 Gm9806-201ENSMUST00000051080 552 ntBASIC20.87■□□□□ 0.93
Homer3Q99JP6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Homer3Q99JP6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Homer3Q99JP6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Homer3Q99JP6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.86■□□□□ 0.93
Homer3Q99JP6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Homer3Q99JP6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.86■□□□□ 0.93
Homer3Q99JP6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.86■□□□□ 0.93
Homer3Q99JP6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Homer3Q99JP6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Homer3Q99JP6 Scarna2-201ENSMUST00000157560 414 ntBASIC20.85■□□□□ 0.93
Homer3Q99JP6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Homer3Q99JP6 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.85■□□□□ 0.93
Homer3Q99JP6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Homer3Q99JP6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Homer3Q99JP6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Homer3Q99JP6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Homer3Q99JP6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Homer3Q99JP6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Homer3Q99JP6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Homer3Q99JP6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Homer3Q99JP6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.84■□□□□ 0.93
Homer3Q99JP6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Homer3Q99JP6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Homer3Q99JP6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Homer3Q99JP6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Homer3Q99JP6 Gm16437-201ENSMUST00000025669 507 ntBASIC20.83■□□□□ 0.93
Homer3Q99JP6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Homer3Q99JP6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Homer3Q99JP6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Homer3Q99JP6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Homer3Q99JP6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.82■□□□□ 0.92
Homer3Q99JP6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
Homer3Q99JP6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Homer3Q99JP6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Homer3Q99JP6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.8■□□□□ 0.92
Homer3Q99JP6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Homer3Q99JP6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Homer3Q99JP6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Homer3Q99JP6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Homer3Q99JP6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.79■□□□□ 0.92
Homer3Q99JP6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Homer3Q99JP6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.79■□□□□ 0.92
Homer3Q99JP6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Homer3Q99JP6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
Homer3Q99JP6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms