Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.41■■□□□ 1.5
Rfc4Q99J62 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rfc4Q99J62 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.41■■□□□ 1.5
Rfc4Q99J62 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rfc4Q99J62 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rfc4Q99J62 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rfc4Q99J62 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.4■■□□□ 1.5
Rfc4Q99J62 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC24.4■■□□□ 1.5
Rfc4Q99J62 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rfc4Q99J62 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rfc4Q99J62 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Rfc4Q99J62 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Rfc4Q99J62 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
Rfc4Q99J62 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Rfc4Q99J62 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
Rfc4Q99J62 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rfc4Q99J62 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Rfc4Q99J62 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Rfc4Q99J62 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Rfc4Q99J62 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc4Q99J62 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc4Q99J62 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.38■■□□□ 1.49
Rfc4Q99J62 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc4Q99J62 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc4Q99J62 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rfc4Q99J62 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rfc4Q99J62 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Rfc4Q99J62 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rfc4Q99J62 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rfc4Q99J62 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.36■■□□□ 1.49
Rfc4Q99J62 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rfc4Q99J62 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 Gm8495-201ENSMUST00000188740 694 ntBASIC24.35■■□□□ 1.49
Rfc4Q99J62 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rfc4Q99J62 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Rfc4Q99J62 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rfc4Q99J62 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Rfc4Q99J62 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Rfc4Q99J62 Gm9870-201ENSMUST00000063874 645 ntBASIC24.33■■□□□ 1.49
Rfc4Q99J62 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Rfc4Q99J62 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rfc4Q99J62 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.48
Rfc4Q99J62 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rfc4Q99J62 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rfc4Q99J62 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.32■■□□□ 1.48
Rfc4Q99J62 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Rfc4Q99J62 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Gm18284-201ENSMUST00000172604 624 ntBASIC24.3■■□□□ 1.48
Rfc4Q99J62 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rfc4Q99J62 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rfc4Q99J62 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Rfc4Q99J62 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rfc4Q99J62 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rfc4Q99J62 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.29■■□□□ 1.48
Rfc4Q99J62 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Rfc4Q99J62 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Rfc4Q99J62 Gm6139-201ENSMUST00000079261 882 ntBASIC24.29■■□□□ 1.48
Rfc4Q99J62 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rfc4Q99J62 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
Rfc4Q99J62 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rfc4Q99J62 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rfc4Q99J62 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.27■■□□□ 1.48
Rfc4Q99J62 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rfc4Q99J62 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rfc4Q99J62 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.26■■□□□ 1.47
Rfc4Q99J62 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Rfc4Q99J62 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms