Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prdm9Q96EQ9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prdm9Q96EQ9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Prdm9Q96EQ9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm9Q96EQ9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm9Q96EQ9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prdm9Q96EQ9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Prdm9Q96EQ9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Prdm9Q96EQ9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm9Q96EQ9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Prdm9Q96EQ9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.76■□□□□ 0.91
Prdm9Q96EQ9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm9Q96EQ9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prdm9Q96EQ9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Prdm9Q96EQ9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.75■□□□□ 0.91
Prdm9Q96EQ9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Prdm9Q96EQ9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm9Q96EQ9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Prdm9Q96EQ9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Prdm9Q96EQ9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Prdm9Q96EQ9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm9Q96EQ9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.72■□□□□ 0.91
Prdm9Q96EQ9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Prdm9Q96EQ9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Prdm9Q96EQ9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm9Q96EQ9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Prdm9Q96EQ9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.69■□□□□ 0.9
Prdm9Q96EQ9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prdm9Q96EQ9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prdm9Q96EQ9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prdm9Q96EQ9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prdm9Q96EQ9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.67■□□□□ 0.9
Prdm9Q96EQ9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Prdm9Q96EQ9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prdm9Q96EQ9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms