Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pcdhac1Q91Y10 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhac1Q91Y10 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhac1Q91Y10 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhac1Q91Y10 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhac1Q91Y10 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhac1Q91Y10 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhac1Q91Y10 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhac1Q91Y10 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhac1Q91Y10 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhac1Q91Y10 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhac1Q91Y10 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhac1Q91Y10 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhac1Q91Y10 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdhac1Q91Y10 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhac1Q91Y10 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.56■□□□□ 0.72
Pcdhac1Q91Y10 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhac1Q91Y10 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.56■□□□□ 0.72
Pcdhac1Q91Y10 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhac1Q91Y10 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdhac1Q91Y10 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhac1Q91Y10 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhac1Q91Y10 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhac1Q91Y10 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhac1Q91Y10 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhac1Q91Y10 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhac1Q91Y10 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhac1Q91Y10 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Pcdhac1Q91Y10 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhac1Q91Y10 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhac1Q91Y10 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhac1Q91Y10 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhac1Q91Y10 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.5■□□□□ 0.71
Pcdhac1Q91Y10 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhac1Q91Y10 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhac1Q91Y10 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhac1Q91Y10 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhac1Q91Y10 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms