Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdhb3Q91XZ7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb3Q91XZ7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb3Q91XZ7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb3Q91XZ7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdhb3Q91XZ7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb3Q91XZ7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb3Q91XZ7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb3Q91XZ7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb3Q91XZ7 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.76■□□□□ 0.91
Pcdhb3Q91XZ7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb3Q91XZ7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb3Q91XZ7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb3Q91XZ7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb3Q91XZ7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb3Q91XZ7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhb3Q91XZ7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.75■□□□□ 0.91
Pcdhb3Q91XZ7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb3Q91XZ7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb3Q91XZ7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb3Q91XZ7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb3Q91XZ7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.73■□□□□ 0.91
Pcdhb3Q91XZ7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb3Q91XZ7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Gm7332-201ENSMUST00000118351 454 ntBASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb3Q91XZ7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb3Q91XZ7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.7■□□□□ 0.91
Pcdhb3Q91XZ7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb3Q91XZ7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.7■□□□□ 0.9
Pcdhb3Q91XZ7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.7■□□□□ 0.9
Pcdhb3Q91XZ7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms