Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Gm42569-201ENSMUST00000200539 472 ntBASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cspg4Q8VHY0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cspg4Q8VHY0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cspg4Q8VHY0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cspg4Q8VHY0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg4Q8VHY0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg4Q8VHY0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cspg4Q8VHY0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg4Q8VHY0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cspg4Q8VHY0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cspg4Q8VHY0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg4Q8VHY0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg4Q8VHY0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg4Q8VHY0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cspg4Q8VHY0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.31■□□□□ 0.52
Cspg4Q8VHY0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cspg4Q8VHY0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.3■□□□□ 0.52
Cspg4Q8VHY0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.3■□□□□ 0.52
Cspg4Q8VHY0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg4Q8VHY0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cspg4Q8VHY0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 Gm43017-201ENSMUST00000198296 752 ntBASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 Gm10493-201ENSMUST00000097270 612 ntBASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cspg4Q8VHY0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cspg4Q8VHY0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg4Q8VHY0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cspg4Q8VHY0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cspg4Q8VHY0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Cspg4Q8VHY0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cspg4Q8VHY0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg4Q8VHY0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg4Q8VHY0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg4Q8VHY0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg4Q8VHY0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cspg4Q8VHY0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cspg4Q8VHY0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cspg4Q8VHY0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cspg4Q8VHY0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Gm42642-201ENSMUST00000200683 355 ntBASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cspg4Q8VHY0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Gm26833-201ENSMUST00000180899 440 ntBASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cspg4Q8VHY0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms