Protein–RNA interactions for Protein: Q8VEM1

Rnf130, E3 ubiquitin-protein ligase RNF130, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf130Q8VEM1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf130Q8VEM1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf130Q8VEM1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.78■□□□□ 0.76
Rnf130Q8VEM1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf130Q8VEM1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf130Q8VEM1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf130Q8VEM1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf130Q8VEM1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf130Q8VEM1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf130Q8VEM1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Rnf130Q8VEM1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Cap2-205ENSMUST00000225824 1634 ntBASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf130Q8VEM1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf130Q8VEM1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf130Q8VEM1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf130Q8VEM1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf130Q8VEM1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf130Q8VEM1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf130Q8VEM1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf130Q8VEM1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf130Q8VEM1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.69■□□□□ 0.74
Rnf130Q8VEM1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf130Q8VEM1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Rnf130Q8VEM1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.69■□□□□ 0.74
Rnf130Q8VEM1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms