Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Retreg1dQ8VE91 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg1dQ8VE91 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg1dQ8VE91 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg1dQ8VE91 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.72■□□□□ 0.91
Retreg1dQ8VE91 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retreg1dQ8VE91 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.72■□□□□ 0.91
Retreg1dQ8VE91 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retreg1dQ8VE91 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg1dQ8VE91 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.69■□□□□ 0.9
Retreg1dQ8VE91 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Gm7417-201ENSMUST00000192950 473 ntBASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg1dQ8VE91 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg1dQ8VE91 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.66■□□□□ 0.9
Retreg1dQ8VE91 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.66■□□□□ 0.9
Retreg1dQ8VE91 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.66■□□□□ 0.9
Retreg1dQ8VE91 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg1dQ8VE91 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg1dQ8VE91 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg1dQ8VE91 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retreg1dQ8VE91 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retreg1dQ8VE91 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg1dQ8VE91 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg1dQ8VE91 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.63■□□□□ 0.89
Retreg1dQ8VE91 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg1dQ8VE91 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retreg1dQ8VE91 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms