Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sgms1Q8VCQ6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Sgms1Q8VCQ6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Sgms1Q8VCQ6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sgms1Q8VCQ6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Sgms1Q8VCQ6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Sgms1Q8VCQ6 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgms1Q8VCQ6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.81■■□□□ 1.24
Sgms1Q8VCQ6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sgms1Q8VCQ6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sgms1Q8VCQ6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sgms1Q8VCQ6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Sgms1Q8VCQ6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgms1Q8VCQ6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgms1Q8VCQ6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.79■■□□□ 1.24
Sgms1Q8VCQ6 Gm45444-201ENSMUST00000211394 898 ntBASIC22.79■■□□□ 1.24
Sgms1Q8VCQ6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgms1Q8VCQ6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgms1Q8VCQ6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sgms1Q8VCQ6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Sgms1Q8VCQ6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sgms1Q8VCQ6 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.78■■□□□ 1.24
Sgms1Q8VCQ6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sgms1Q8VCQ6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sgms1Q8VCQ6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Gm5812-201ENSMUST00000061073 957 ntBASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgms1Q8VCQ6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgms1Q8VCQ6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Sgms1Q8VCQ6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgms1Q8VCQ6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.76■■□□□ 1.23
Sgms1Q8VCQ6 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.76■■□□□ 1.23
Sgms1Q8VCQ6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgms1Q8VCQ6 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.75■■□□□ 1.23
Sgms1Q8VCQ6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Sgms1Q8VCQ6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.73■■□□□ 1.23
Sgms1Q8VCQ6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sgms1Q8VCQ6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sgms1Q8VCQ6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
Sgms1Q8VCQ6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sgms1Q8VCQ6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sgms1Q8VCQ6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sgms1Q8VCQ6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgms1Q8VCQ6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgms1Q8VCQ6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
Sgms1Q8VCQ6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Sgms1Q8VCQ6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms