Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Swsap1Q8VCI7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Swsap1Q8VCI7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Swsap1Q8VCI7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Swsap1Q8VCI7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Swsap1Q8VCI7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Swsap1Q8VCI7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Swsap1Q8VCI7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Swsap1Q8VCI7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Swsap1Q8VCI7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Swsap1Q8VCI7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Swsap1Q8VCI7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Swsap1Q8VCI7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Swsap1Q8VCI7 Gm10232-201ENSMUST00000089221 720 ntBASIC18.84■□□□□ 0.61
Swsap1Q8VCI7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Swsap1Q8VCI7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Swsap1Q8VCI7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Swsap1Q8VCI7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Swsap1Q8VCI7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Swsap1Q8VCI7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Gm45102-201ENSMUST00000207427 857 ntBASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Swsap1Q8VCI7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Swsap1Q8VCI7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Swsap1Q8VCI7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Gm9959-201ENSMUST00000068277 390 ntBASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Swsap1Q8VCI7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Swsap1Q8VCI7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Swsap1Q8VCI7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.77■□□□□ 0.6
Swsap1Q8VCI7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Swsap1Q8VCI7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Swsap1Q8VCI7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.77■□□□□ 0.6
Swsap1Q8VCI7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Swsap1Q8VCI7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Swsap1Q8VCI7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Swsap1Q8VCI7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Swsap1Q8VCI7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Swsap1Q8VCI7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Swsap1Q8VCI7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Swsap1Q8VCI7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms