Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Ssx2ipQ8VC66 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssx2ipQ8VC66 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Gm5812-201ENSMUST00000061073 957 ntBASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Ssx2ipQ8VC66 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssx2ipQ8VC66 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssx2ipQ8VC66 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ssx2ipQ8VC66 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ssx2ipQ8VC66 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ssx2ipQ8VC66 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ssx2ipQ8VC66 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssx2ipQ8VC66 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.38■■□□□ 1.01
Ssx2ipQ8VC66 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssx2ipQ8VC66 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ssx2ipQ8VC66 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssx2ipQ8VC66 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssx2ipQ8VC66 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssx2ipQ8VC66 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ssx2ipQ8VC66 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx2ipQ8VC66 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx2ipQ8VC66 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx2ipQ8VC66 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssx2ipQ8VC66 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Gm45444-201ENSMUST00000211394 898 ntBASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ssx2ipQ8VC66 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssx2ipQ8VC66 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ssx2ipQ8VC66 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssx2ipQ8VC66 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssx2ipQ8VC66 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssx2ipQ8VC66 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssx2ipQ8VC66 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssx2ipQ8VC66 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ssx2ipQ8VC66 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssx2ipQ8VC66 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssx2ipQ8VC66 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ssx2ipQ8VC66 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssx2ipQ8VC66 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssx2ipQ8VC66 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ssx2ipQ8VC66 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ssx2ipQ8VC66 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ssx2ipQ8VC66 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ssx2ipQ8VC66 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.3■■□□□ 1
Ssx2ipQ8VC66 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Ssx2ipQ8VC66 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.3■■□□□ 1
Ssx2ipQ8VC66 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.3■■□□□ 1
Ssx2ipQ8VC66 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssx2ipQ8VC66 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms