Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf8Q8VC56 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf8Q8VC56 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Gm5921-201ENSMUST00000075898 882 ntBASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf8Q8VC56 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf8Q8VC56 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.08■□□□□ 0.81
Rnf8Q8VC56 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf8Q8VC56 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf8Q8VC56 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf8Q8VC56 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf8Q8VC56 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
Rnf8Q8VC56 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf8Q8VC56 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Rnf8Q8VC56 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf8Q8VC56 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf8Q8VC56 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf8Q8VC56 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf8Q8VC56 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf8Q8VC56 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.02■□□□□ 0.8
Rnf8Q8VC56 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.02■□□□□ 0.8
Rnf8Q8VC56 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf8Q8VC56 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf8Q8VC56 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf8Q8VC56 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rnf8Q8VC56 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf8Q8VC56 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf8Q8VC56 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf8Q8VC56 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms