Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Chmp7Q8R1T1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Chmp7Q8R1T1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Chmp7Q8R1T1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Gm9870-201ENSMUST00000063874 645 ntBASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Chmp7Q8R1T1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
Chmp7Q8R1T1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Chmp7Q8R1T1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Chmp7Q8R1T1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp7Q8R1T1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp7Q8R1T1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp7Q8R1T1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp7Q8R1T1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Chmp7Q8R1T1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Chmp7Q8R1T1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chmp7Q8R1T1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chmp7Q8R1T1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chmp7Q8R1T1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chmp7Q8R1T1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chmp7Q8R1T1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Chmp7Q8R1T1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Chmp7Q8R1T1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Chmp7Q8R1T1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Chmp7Q8R1T1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC27.05■■□□□ 1.92
Chmp7Q8R1T1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Chmp7Q8R1T1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
Chmp7Q8R1T1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC27.03■■□□□ 1.92
Chmp7Q8R1T1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Chmp7Q8R1T1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Chmp7Q8R1T1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.92
Chmp7Q8R1T1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Chmp7Q8R1T1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
Chmp7Q8R1T1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.99■■□□□ 1.91
Chmp7Q8R1T1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC26.99■■□□□ 1.91
Chmp7Q8R1T1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Chmp7Q8R1T1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms