Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.97■□□□□ 0.95
Zcchc9Q8R1J3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zcchc9Q8R1J3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zcchc9Q8R1J3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zcchc9Q8R1J3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zcchc9Q8R1J3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zcchc9Q8R1J3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zcchc9Q8R1J3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zcchc9Q8R1J3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Zcchc9Q8R1J3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.94■□□□□ 0.94
Zcchc9Q8R1J3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zcchc9Q8R1J3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Zcchc9Q8R1J3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zcchc9Q8R1J3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zcchc9Q8R1J3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.9■□□□□ 0.94
Zcchc9Q8R1J3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zcchc9Q8R1J3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zcchc9Q8R1J3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Zcchc9Q8R1J3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Zcchc9Q8R1J3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zcchc9Q8R1J3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.88■□□□□ 0.93
Zcchc9Q8R1J3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zcchc9Q8R1J3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.88■□□□□ 0.93
Zcchc9Q8R1J3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zcchc9Q8R1J3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zcchc9Q8R1J3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zcchc9Q8R1J3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zcchc9Q8R1J3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zcchc9Q8R1J3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zcchc9Q8R1J3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zcchc9Q8R1J3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zcchc9Q8R1J3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Zcchc9Q8R1J3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms