Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfwd3Q8CIK8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfwd3Q8CIK8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Rfwd3Q8CIK8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfwd3Q8CIK8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.73■□□□□ 0.75
Rfwd3Q8CIK8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfwd3Q8CIK8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfwd3Q8CIK8 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.71■□□□□ 0.75
Rfwd3Q8CIK8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rfwd3Q8CIK8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rfwd3Q8CIK8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.71■□□□□ 0.75
Rfwd3Q8CIK8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rfwd3Q8CIK8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfwd3Q8CIK8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfwd3Q8CIK8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfwd3Q8CIK8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rfwd3Q8CIK8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfwd3Q8CIK8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rfwd3Q8CIK8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfwd3Q8CIK8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.69■□□□□ 0.74
Rfwd3Q8CIK8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfwd3Q8CIK8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfwd3Q8CIK8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.69■□□□□ 0.74
Rfwd3Q8CIK8 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfwd3Q8CIK8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfwd3Q8CIK8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Gm15546-201ENSMUST00000122095 826 ntBASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Gm10232-201ENSMUST00000089221 720 ntBASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Rfwd3Q8CIK8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfwd3Q8CIK8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfwd3Q8CIK8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rfwd3Q8CIK8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rfwd3Q8CIK8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rfwd3Q8CIK8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rfwd3Q8CIK8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rfwd3Q8CIK8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.64■□□□□ 0.73
Rfwd3Q8CIK8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rfwd3Q8CIK8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfwd3Q8CIK8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfwd3Q8CIK8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfwd3Q8CIK8 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfwd3Q8CIK8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfwd3Q8CIK8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms